YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|213051774
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFFRKTALA ALVMGFSGAA FALPNITILA TGGTIAGGGD SATKSNYTAG KVGVENLVDA  60
   61 VPQLKDIAVV KGEQVVNIGS QDMNDEVWLT LAKKINTECD STDGFVITHG TDTMEETAYF 120
  121 LDLTVKCNKP VVLVGAMRPS TSMSADGPFN LYNAVVTAAD KQSANRGVLV VMNDTVMDGR 180
  181 DVTKTNTTDV ATFKAVNYGP LGYIHNGKID YQRTPERKHT TSTPFDVSKL TALPKVGIVY 240
  241 NYANASDLPA KALVDAGYDG IVSAGVGNGN LYKTVFDTLA TAAHNGTVVV RSSRVPTGAT 300
  301 TQDAEVDDAK YGFVASGTLN PQKARVLLQL ALTQTKDPKQ IQTMFNQY

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	348	0.99