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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25290739
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNQKELTLD IQGMTCAACS NRIEKGLQRM DGVQEANVNL TLERSTVVYD PEKVQPEQVI  60
   61 EKVEQLGYKV VIDRVEFDVV GMTCAACANR IEKKLNRLEG VHKAVVNLAL ETATVEYRPE 120
  121 SVSPSDLEQA IEQIGYTLKR KTGDAEEGDV RERELQKQKR RFWISAVLTL PLLWSMVTHF 180
  181 EFTSFIWMPH LFMDPWVQLL LATPVQFYIG APFYVGAYKA LRHKSANMDV LVALGTSAAY 240
  241 FYSMYLGYDW LYGTREGMMP ELYFEASAII ITLIVLGKYF EARAKGRTSE AIRKLLGLQA 300
  301 KTARVIREGK EEQIPLEEVK TGDLLLVKPG EKIPVDGEVV EGYSAVDESM LTGESIPVEK 360
  361 DVGDQVIGAT VNHNGSLRIR ATRVGKDTAL AQIVKVVEEA QGSKADIQRA VDKVSSIFVP 420
  421 VVVAISVLTF LVWYMVIDPG NVTSALIPTI SILVIACPCA LGLATPTSIM AGSGRSAELG 480
  481 VLFKGGEHLE HTQRIDTVVL DKTGTVTEGK PSLTDFVTYG SADEKEMATM LHAAERRSEH 540
  541 PLATAIVDGM KQLGVDRLEA DSFSAIPGHG VEAMVAGRNV LVGTRKLMAE HQVDYKEALS 600
  601 SAEAREARGE TVMFMAVDGI LTAHVAVADQ LKSSSKKAIE RLKALGLDIV MLTGDNERTA 660
  661 RAVANDVGIE QVIAEVLPKD KSEQIRKLQK QGRTVAMVGD GLNDAPALAT ADVGMAIGSA 720
  721 TDIPIEAADL TLLGDDLHRV ADAVLMSQKT MRNIKQNLFF AFVYNTSAIP IAAAGLLAPW 780
  781 VAGAAMAFSS VSVVLNALRL QRFQIK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle