YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15964111
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLSGKRILL IISGGIAAYK SLDLIRRLRE RGADVRPVMT AAAQRFVTPL TVGAISASHV  60
   61 FTELFAREDE QDVGHIRLAR HCDLVVVAPA TADLMAKMAH GHADDLASTV LLATDRPVLL 120
  121 APAMNPRMWS HPATLRNRAT LAGDGVRFVG PATGEMAESG EAGEGRMAEP LEIVAAVEEL 180
  181 FSEARPLAGR KAIVTSGPTH EPIDPVRYIA NRSSGKQGHA IAAALARLGA EVTLVSGPVT 240
  241 IADPAGVRVV RVERAEEMRD AVLAALPADV AVMVAAVADW RVASTAGNKI KKRPGEAPPP 300
  301 LQLAENPDIL KTVGHYASRP RLVIGFAAET ENVAENGRAK LQKKGADYIL ANDVSPATGI 360
  361 MGGDRNRVKL IGRDGTEEWP EMGKDDVAAK LAALIVAKLS S

Type	Start	End	Confidence
Signal Peptide	1	18	0.53
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	401	0.96