YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25503473
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPFSAVSAI IITCLVLSSC GFGGSRPSRE TTSSVVRPAS PVPSAAISAA AAQAAPQPEA  60
   61 LAWAGTVPQP QAFMPAERAV GMPVPAERPI AMLAPENPAR EPRGRSRVYS HSFRDAHPIN 120
  121 FGTRSPRKLA VHGVDVSRWQ GDINWAKLRT QGANFAYIKA TDGGDHLDPM FKKNWRRADE 180
  181 AGLKRGAYHF FYWCRTAGEQ ADWFIRNVPR DPSALPPVID VEWNGESSCK RRPSPERVRE 240
  241 KMQVFMDKLE RHYGQRPIIY TAPDFYRDNL QGAFPNHPFW LRSVAAHPSK VYPGRKWVFW 300
  301 QYSGSGLSHG VDGRIDLNVF NGSEEDWHNW VSARSS

Type	Start	End	Confidence
Signal Peptide	1	23	0.95
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	336	0.99