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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|147900293, gi...
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAHEILRNL RIPELGDVRQ YVRTLPTNTL MGFGAFAALT TYWYATRPKA LKPPCDLAMQ  60
   61 SVETQGGEHA RRSTILDSDE VITYYYDDVK TIYDIFQRGV RVSNNGPCLG HRKPNQPYEW 120
  121 ISYKEVAERA EFVGSALLHR GFKPSPDQFI GIFAQNRPEW TIVELGCYTY SMVAVPLYDT 180
  181 LGAEAITYII NRADLSVVFC DSPEKAKLLL SNVEKGETPV LRTIVLMNPF DSDLVERGKK 240
  241 CGVGLVSLKD IEEEGKANRE KPKPPKPDDL AVVCFTSGTT GNPKGAMLSH KNIVSNSAGF 300
  301 MKVTEDLMFP STQDVLISFL PLAHMFERVV ECVVLCHGAR IGFFQGDIRL LMDDLKALQP 360
  361 TIFPVVPRLL NRMFDRIFGQ ANTPVKRWML EFASKRKEAE LRSGIIRNDS FWDKIIFHKV 420
  421 QESLGGKVRL MVTGAAPVSP TVLTFLRAAL GCQFYEGYGQ TECTAGCSLT IPGDWTAGHV 480
  481 GAPMPCNHVK LVDVEEMNYF AAKGEGEVCV KGSNVFQGYL KDEEKTAEAL DKDGWLHTGD 540
  541 IGKWLPNGTL KIIDRKKHIF KLAQGEYIAP EKIENIYTRS EPVVQVFVHG ESLQAFLVGI 600
  601 IVPDPENVIN WAKKRKFEGS YEELCKNKDF KNAILEDLLK LGKEAGLKTF EQVKDIALCS 660
  661 EMFSIENGLL TPTLKAKRPE LRKSFKDQIE ELYANNKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle