YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|147902657, gi...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIAGPVRVI VILLTVGLTW ILASIMLGTQ SGFPRIPALI GGHEPMSTAD PRPRKFKCGL  60
   61 PRPCPEKHFA FRVVSGAANV IGPKICLEDK ILLSSIQNNV GRGLNVALVN GVNGELIDAK 120
  121 TFDMWSGDVS ELLNFLRPIQ EGTVVLVASF DDPATKMNED ARKTFAELGS ASIKDVGFRD 180
  181 SWAFVGAKGV QDKSPFEQLI KNNKNTNKYE GWPEAVELEG CIPHRTREEE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.58
Transmembrane Helix	9	28	0.65
Non-Cytoplasmic	29	230	0.97