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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51965000, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSSWGGGG GGGGGAVRLW CCGLLLMLLS GGGGGGGAAA QRPPAYKTLS GNAPIVIAEG  60
   61 GFSGVFPDSS KNAYVFALSS TSGDTVLWCN VQLTKDGVGI CLRDLLMDNC TSISQAYRAG 120
  121 KKAYLVNGEE KKGWFPIDYT MSSLQSVILT QAIWSRTDKF DFAFLPILPV TNVIDLAKPS 180
  181 SVWLNIEHDI FYRQHGLNMT KYILSIPKGG SVQYISSPEL GFLQSISGRV NRKTKLVFRF 240
  241 LDATSSDPSS NQTYGSLLSN LTFIKTVASG IMVPKEYIWP VTTNNYIQPA KSIVRDAHSA 300
  301 GLEIYASDFA NDRIIPYNYS YDPLEEYLHF VGSDNFSVDG VLSEFPLTAA AAIGCFTNLN 360
  361 VSSKTDHGSP LIISHNGASG DYPDCTDLAY QKAVDDGADV IDCSIQMTSD GVPVCMSSIN 420
  421 LFETTNVQRT PFSNRASIFK DIQPTPGIFT FNLTWADISS SDLRPKISSP ESIYYLVRNP 480
  481 VHKNAGNFFR LSDFLTFAKD KDLSGIMIII KNAVFMANSL GFDVVDSVTK ALSDAGYNNQ 540
  541 TTKAKEVMIQ SEDSAVLVNL KQLETKYKLV YTLPSTIGDA SASSLVDVKK FADAVIVDRE 600
  601 SIFPESQGFI MKETNLVKDL RSAGLAIYAQ VFRNEFVSPP WDFFSDVTVE INSYVQSVNI 660
  661 DGIITDFPKT VRRYKMNSCT GLGVNMPSYM NPAEIGGLAQ LLNGSQAQPP ALAPMPVLNS 720
  721 SDVTEPPFPS AAPKNAPGGA ANGSTPAPGA SPSGSQAAAV MRAGILPMVT ALFASLLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle