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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATPBM_ORYSA
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRRALSSL VRAASRLRGA SPAPRPRGPL HRPSPSGYLF NRAAAYATAA AAKEAAPPAP  60
   61 ATGKATGGGK ITDEFTGAGA VGQVCQVIGA VVDVRFDEGL PPILTALEVL DHNIRLVLEV 120
  121 AQHLGENMVR TIAMDGTEGL VRGQRVLNTG SPITVPVGRA TLGRIMNVIG EPIDEKGDIT 180
  181 TNHFLPIHRE APAFVEQATE QQILVTGIKV VDLLAPYQRG GKIGLFGGAG VGKTVLIMEL 240
  241 INNVAKAHGG FSVFAGVGER TREGNDLYRE MIESGVIKLG DKQSESKCAL VYGQMNEPPG 300
  301 ARARVGLTGL TVAEHFRDAE GQDVLLFIDN IFRFTQANSE VSALLGRIPS AVGYQPTLAT 360
  361 DLGGLQERIT TTKKGSITSV QAIYVPADDL TDPAPATTFA HLDATTVLSR QISELGIYPA 420
  421 VDPLDSTSRM LSPHVLGEDH YNTARGVQKV LQNYKNLQDI IAILGMDELS EDDKLTVARA 480
  481 RKIQRFLSQP FHVAEVFTGA PGKYVELKES VNSFQGVLDG KYDDLPEQSF YMVGGIEEVI 540
  541 AKAEKIAKES AS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle