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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215769281, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGGAWKQSG VADHVGYLGG GGGALVGRAR RARLCLYGLA LAFGAFAAFL AFAPSLPAPP  60
   61 PSSPAAAWFD GLLASASPYR AQVSGYFSSL FPANSTSPEP PGGAATNRRG SSGGGGFSAT 120
  121 GGQAGTNGSS TVVAGEQGRG VEVSSSNAGG VPSGNSPSGN ATAAMQSNPP PNDQAGGGAA 180
  181 ANNSTTGSAG EAAVPSRSSA RNGTMTKDGA PDRINGTDVI ASSSGDVTAV KANARNAAGS 240
  241 THQLGGASAI VDSSNGTAAP SINKTGNAAV ATDGNGAAPQ RGGAPGKNQT VPNPPAALDQ 300
  301 NKSGSRAAAS GGSNSTMDAT PQGIASNTTE AAVDAGGKKK KTHWIEAMAS CDMFYGNWVR 360
  361 DDSYPLYPEG SCPHIDESFN CPLNGRPDNA YQRLRWQPSG CSIPRLNPSD MLERLRGKRL 420
  421 VFVGDSLNRN MWESLVCILR NSVKDKRKVF EVSGRQQFRA EGSYSFLFQD YNCSVEFFRS 480
  481 PFLVQEWEFP VRKGLTKETL RLDMISNSFP RYKDADIIIF NTGHWWTHEK TSLGKDYYQE 540
  541 GNRVYSELNV DDAFQKALIT WAKWVDSSVN PKKTTVFFRG YSSSHFSGGQ WNSGGSCDKE 600
  601 TEPITNEKFL TPYPRKMSIL EDVLSGMKTP VVYLNITRMT DYRKEAHPSV YRKQKLTEEE 660
  661 KKSPQIYQDC SHWCLPGVPD SWNELLYAQI MVKQHQMLHQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle