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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|229371752, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRMTLCAAS IACALASTAM AAPSAPSVDV YGSNNLQFSK IELAMETTAG YNQMVKYHEE  60
   61 APITLKFNQW SGVTGNTYKI YFDGVEVATG PISGSQTTAQ FTYPKGGVYQ LVIEACDATG 120
  121 CTKSAPSEIT IADTDGSHLK PLKMNVDPNN KSYTIPQNTV IGTYFVEWSI YDRKFTVDNI 180
  181 PGQNLTHILY GFIPICGPNE SLKSVGGNSF NALQTACKGV PDFEVVIHDP WAAYQKSFPQ 240
  241 AGHQYSSPIK GNYAMLMALK KTYPDLKIIP SIGGWTLSDP FFSFTDKAKR DVFVASVKRF 300
  301 LKTWKFYDGV DIDWEYPGGG GQAADLGDPV KDGPAYVALM AELRAMLDEL EAETGRKYEL 360
  361 TSAIGVGHDK IEDVNYGQAV QYMDYIFAMT YDFYGGWNNV LGHQTALYCG SFMRPGQCDG 420
  421 KGVDENGEPY KGPAYTTDNG IQLLLAQGVP PSKLVVGAAM YGRGWEGVTP ASLKDPNDPM 480
  481 TGVGNGKLKG TTAQGVWEAG VIDYKGVKNF MLGANKTGVN GFEYGYDEQA EAPWVWNRTT 540
  541 GQLVTFDDDR SVKAKGAYVR NLGLAGLFSW EIDADNGDIL NAMHEGLAGG TTTPPVNKAP 600
  601 VANAGADITV TGPAAVSLDG SASKDSDGSI ASYLWEQTAG PAVTLTGANS AKASFNAAEV 660
  661 TEKQTFTFKL TVTDNKGATA TDTVVVTVNP KSTTPVNTAP VAALSAPASV KAGATVVVDA 720
  721 SASSDADQDP LSFTWDLPVG VNATVQGAKV TFVAGEYTQD TTLDFTVTVS DGKATSKASA 780
  781 SVLVEKKAGT GGDACTNLWN AESIYTGGQQ VTWAGKTWEA KWWTRGEDPS KSGQWGVWKD 840
  841 LGAASCSTH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle