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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124119769, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKQILLAT LLATSVSANG AEKFVVQDIQ IDGLQRVALG AALLKMPVRV GDSVDSQDVA  60
   61 NIIKALYSSG NFEDVKVLRD GNTLMVQVKE RPTIASVSFS GNKAIKEEQL KQNLEASSIR 120
  121 VGEALDRTTL SNIEKGLEDF YYSVGKYNAT VKAVVTPLPR NRADLKFVFT EGVSAKIQQI 180
  181 NFIGNQVFSD EELLSRFNLN VDVAWWNFLA DDKYKKQVLA GDIEALRTYY LDRGYLKFQV 240
  241 DSTQVAISPD KKGVYITLNL NEGEPYTVSK VQFRGELMGK EAEFTSLIPF EIGETYNGSA 300
  301 VTRLEESVKK VLGESGYAYP QVRTIPEFDD EKQQVSLVVH VEAGKRVYVR DIRFVGNNST 360
  361 RDEVLRREMR QMEGSWLNSK DIETGKTRLN RLGFFETVEV QTVRVPGSED QVDLVYSVKE 420
  421 ANSGNVNFGV GYGTESGVSF QVGLQQDNFL GSGNRVGVNA MINDYQKNLT LEYRDPYWNL 480
  481 DGVSLGGKVF YNQFEASEAG IVDYTNESYG TSLTWGFPFD ELNRFEFGIG YTHNKIGNLT 540
  541 PYLQVENFLA AQASNIDSGG NLLTDDFDIN LSWTRNNLNN SYFPTAGNHQ RAFYKMTVPG 600
  601 SDAQYFKLQY DVRQYFPLTK KHEFTLLLRG RLGYGNGYGQ TDGKDNLFPF YENFYAGGFT 660
  661 SLRGFGSNSA GPKAVYRDYS GSNNGSDTAT DDSVGGNAIA LASVELIVPT PFASEEARNQ 720
  721 IRTSIFYDMA SVWDTEFDYR GKADYGNQYY YDYSDPTNYR SSYGVALQWV SPMGPLVFSL 780
  781 AKPIKKYEGD DEEFFTFTIG RTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle