YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229370055, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKWLHPYAK PDAAYQLCGK LLPWFASLGF LFLAVGTVLG LAYAPADYQQ GDSFRIIYIH  60
   61 VPAAIWSMGV YMSMAIAAFI GIVWQLRISD MAALAMAPIG AVYTFIALIT GAIWGKPMWG 120
  121 AWWVWDARLT SELVLLFLYL GVIALYHAFD DQKTAAKAAG ILAIVGVINL PIIHFSVEWW 180
  181 NTLHQGATIT KFAKPSIAPE MLWPLLACIL GFAFFFAALT MIRLRNEILS RESHRPWVSE 240
  241 LANQTVRGNR

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	44	0.94
Non-Cytoplasmic	45	62	0.88
Transmembrane Helix	63	84	0.93
Cytoplasmic	85	92	0.83
Transmembrane Helix	93	114	0.93
Non-Cytoplasmic	115	128	0.83
Transmembrane Helix	129	149	0.91
Cytoplasmic	150	157	0.82
Transmembrane Helix	158	177	0.93
Non-Cytoplasmic	178	201	0.94
Transmembrane Helix	202	222	0.95
Cytoplasmic	223	250	0.96