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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|229368989, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNREVVTMST GNTLPPALAA LASPLNDAQL NQLQQTVTQL NAQQLAWVSG YFWGLSQSNA  60
   61 LSVPHISAGQ TASAASGKLT IIFASQTGNA KGVAQALLKE AQAAGIQAQL FDASDYKGKD 120
  121 LAKETHVIFV ASTNGEGEAP DNALALHEFL KSKKAPKLPN LKYGVLGLGD SSYQFFCQTG 180
  181 KDFDQFLENL GAQRLVERLD ADVDYQAAAT EWRKQVLSIL KDELTGAAAV TSVATFAVSQ 240
  241 TAESHYSKEQ PYTASLSTSQ KITGRDSGKD VRHIEIDLAD SGITYQPGDA LGVWYENRPQ 300
  301 LVNALLDSVG LSGHEEVQVD GETLSLHSAL THHYEITAAN PQLVAQFAEL AQSEKLTSLA 360
  361 QDKEALREYA TRTQVIDVLR EEKVTLSAIQ LLSLLRRLTP RLYSIASSQS EVGEEVHLTV 420
  421 GVVEYEYEGE QRLGGASSFL AHQLEEGAPV KVFVEHNNNF KLPSDDNAPL IMVGPGTGIA 480
  481 PFRSFIQERE NRGAAGKNWL LFGDRTFTQD FLYQVEWQKY LKSGVLNRLD VAFSRDQHEK 540
  541 VYVQHRLLEQ AELVWQWLQE GAYFYVCGDA SRMAKDVHQA LITVVEQQGG LNREQAEEYV 600
  601 SELRKAKRYQ RDVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle