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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28871631, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.47
Topology Confidence: 0.13
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNLILWLI IAAVLVTVMN NFSSPNEPQN FNYSEFIQQV KDGKVEKVSV DGYVITGKRS  60
   61 DGDTFKTIRP NIPDNGLIGD LVSNNVVVEG KQPEQQSIWT QLLVASFPIL VIIAVFMFFM 120
  121 RQMQGGAGGK GGPMSFGKSK ARLLSEDQVK TTLADVAGCD EAKEEVGELV EFLRDPGKFQ 180
  181 RLGGRIPRGV LMVGPPGTGK TLIAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFE 240
  241 QAKKHAPCII FIDEIDAVGR HRGAGMGGGH DEREQTLNQL LVEMDGFEMN DGIIVIAATN 300
  301 RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILKVHMRKV PMGEDVNPGV IARGTPGFSG 360
  361 ADLANLVNEA SLFAARSGKR VVEMKEFELA KDKIMMGAER KSMVMSDKEK RNTAYHEAGH 420
  421 AIVGRLVPEH DPVYKVSIIP RGRALGVTMF LPEEDRYSLS KRALISQICS LYGGRIAEEM 480
  481 TLGFDGVTTG ASNDIMRASQ IARNMVTKWG LSEKLGPLMY SEDEDGGYLG RGGSQNSSVS 540
  541 GDTAKLIDSE VRSIIDHCYG TAKQLLTDNR DKLEAMADAL MKYETIDADQ IDDIMTGRPP 600
  601 REPRDWDGGS GTNGTPITPD PRPETPIGGP AAEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle