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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31433587, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRKRTVGP AAAAATFPEL PEEIVMEILA RLPVKSLLRF KSVCRGWRGG VRRRRGGAAT  60
   61 GGSGKASGDR RREQGARPAV ARRGIRQRRD AVARHSAAAR RGRETATDGR PVTAGARPRG 120
  121 RGAGARRRPA NSCSSAGQRP AALRQAQFQT LWDRHSKSRK VGLGSGSGST TQPVRIDSEV 180
  181 AVPSVQPITD ANESPVQIQI TAVEVVPEVA ASDAARDVTE PETEVASNDP DIATAVTQQE 240
  241 QPSTWSPIRD WSPIRDGDDE ETEYDSSDEA IYDIDLLCHD PGRRIAIKNY DVNERNSVIR 300
  301 GYIALGPCQP RSHSFPIRKI GGKPRRFLPS WYDEFKWLEY SVEQDAAFCF ICYLFKHKIN 360
  361 NSGGDAFVNR GFRNWHMRKR IAKHVGGMTS FHNVAQDKYN HFLAPKTNIV ESFAATNEQD 420
  421 KARYMARLNY SMKCLKFLLR QGLAARGHYE SEKSLNKGNF LEMLSMLAEN FEEVGKVVLN 480
  481 NAPKNCKLTA PEIQKQIANC CAKETTKLIM EDLGDEYFAI LADESSDVYQ KEQLALCLRY 540
  541 VDKKGRVVER FLGVVHVENT TSLTLKAAIE SLLMEHSLSL SKVRGQGYDG ASNMKGHANG 600
  601 LKKLIMDECP SAYYVHCFAH QLQLTLVAVA KENPDCVWFF EQLRFLLNLL GNSCKKTEML 660
  661 RVAQAQRIVE ELDLGDIETG KGLNQEMGLG RPADTRWGSH YKTVMHVLSL YPSIQKVLIM 720
  721 VGKDRSFGAE CANAQTVLTI FQSFEFVFMA HLMQTVLGFT SDLNHALQKR DQDIVNAVGL 780
  781 ILLTKFQLQQ LREDPGWDDF LQEVQSFCVK HKIKIPDMDS FYRPVGRDRR FFIKIKNMHR 840
  841 FHVDMFLSVI DRQLQELNER FDEVNTDLLL CMAAFSPIDN FASWDKDKLI KLARFYPNDF 900
  901 SSTEMNHLPS ALKLFLTEMR IDERREYPTF KSWLRHCFIR TQLQCSASRR QQEPSILISP 960
  961 HFRHDRPTKF STHISFYQWE QGASSLARIM DAKDFPVGHK FRLISHYTHC DGLVLAPTIT1020
 1021 KLYLFNPATR EAITLPDGHG HSHTAGLGLD PGTGRYKVVR SFYRSPSMDP PVSMGMEVLT1080
 1081 VGEPGARWRE TAVDPPHPIT RWRTALAVNG GYLFWYMDRR RYPDDAPRGL LRFSLRDEAF1140
 1141 AVTRLPESMD PTLDENVLPD VLHGELCVVQ ALPDKAGVLI WTMSSSSMDN DDVHLDDGPW1200
 1201 ELRYCICVNA LCHPLGVLPD GGGILLWANR SVHRYDFSAR KLAGVVCNLD RIRYQGGRPA1260
 1261 RWKSVVDFTL MPYTESLVRI TAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle