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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125575276, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRAASRVR AGAVGALRSE GSTQGRGGRT GGSGAEDARH VFDELLRRGR GASIYGLNCA  60
   61 LADVARHSPA AAVSRYNRMA RAGADEVTPN LCTYGILIGS CCCAGRLDLG FAALGNVIKK 120
  121 GFRVDAIAFT PLLKGLCADK RTSDAMDIVL RRMTQLGCIP NVFSYNILLK GLCDENRSQE 180
  181 ALELLQMMPD DGGDCPPDVV SYTTVINGFF KEGDLDKAYG TYHEMLDRGI LPNVVTYSSI 240
  241 IAALCKAQAM DKAMEVLTSM VKNGVMPNCR TYNSIVHGYC SSGQPKEAIG FLKKMHSDGV 300
  301 EPDVVTYNSL MDYLCKNGRC TEARKMFDSM TKRGLKPEIT TYGTLLQGYA TKGALVEMHG 360
  361 LLDLMVRNGI HPNHYVFSIL ICAYAKQGKV DQAMLVFSKM RQQGLNPDTV TYGTVIGILC 420
  421 KSGRVEDAMR YFEQMIDERL SPGNIVYNSL IHSLCIFDKW DKAKELILEM LDRGICLDTI 480
  481 FFNSIIDSHC KEGRVIESEK LFDLMVRIGV KPDIITYSTL IDGYCLAGKM DEATKLLASM 540
  541 VSVGMKPDCV TYNTLINGYC KISRMEDALV LFREMESSGV SPDIITYNII LQGLFQTRRT 600
  601 AAAKELYVGI TESGTQLELS TYNIILHGLC KNNLTDEALR MFQNLCLTDL QLETRTFNIM 660
  661 IGALLKVGRN DEAKDLFAAL SANGLVPDVR TYSLMAENLI EQGLLEELDD LFLSMEENGC 720
  721 TANSRMLNSI VRKLLQRGDI TRAGTYLFMI DEKHFSLEAS TASLFLDLLS GGKYQEYHSC 780
  781 IRGGIFSLCV NSEVQENHLL DSESGVHFLL KLLNPPVNLV DSKAPSIGSK LLGISKVQML 840
  841 NGSNKDSDCI SEEILSKVEE ILLSCQVIKS LDKDDKKTTR PELCPKWLAL LTMENACLSA 900
  901 VSVEETSDTV SRVGGNFKET LREMGGLDSI FDVMVDFHST LENLIKDTST SALDRNEGTS 960
  961 LQSAALLLKC LKILENAIFL SDDNKTHLLN MSRKLNPKRS LLSFVGVIIN TIELLSALSI1020
 1021 LQNSSVVSSS TYPKSSKVSQ QSYSVVMAGG DRGRGVECHP HQGVSAALLR PGPQALAASW1080
 1081 RRRETVVRSD FAAGGVATMG DSPQALSDRL CGSATKVWRG GAEWTAEAFA RNGAAGPSQS1140
 1141 RLPVTRNRAQ HYIAKIWATL TISMFYKLDV EGMENLPPNS SPAIYVANHQ SFLDIYTLLT1200
 1201 LGRCFKFISK TSIFMFRII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle