YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26252164, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGFYISKT LGILGILLGV AAVCTIIALS VVYAQEKNRN AENSATAPTL PGSTSATTAT  60
   61 TTATTTATTT PAVDESKPWN QYRLPKTLIP DSYRVILRPY LTPNNQGLYI FQGSSTVRFT 120
  121 CNQTTDVIII HSKKLNYTLK GNHRVVLRTL DGTPAPNIDK TELVERTEYL VVHLQGSLVE 180
  181 GRQYEMDSEF QGELADDLAG FYRSEYMEGG VKKVVATTQM QAADARKSFP CFDEPAMKAM 240
  241 FNITLIYPNN LIALSNMLPK ESKPYPEDPS CTMTEFHSTP KMSTYLLAYI VSEFKNISSV 300
  301 SANGVQIGIW ARPSAIDEGQ GDYALNVTGP ILNFFAQHYN TSYPLPKSDQ IALPDFNAGA 360
  361 MENWGLVTYR ESSLVFDSQS SSISNKERVV TVIAHELAHQ WFGNLVTVAW WNDLWLNEGF 420
  421 ASYVEYLGAD YAEPTWNLKD LMVLNDVYRV MAVDALASSH PLSSPADEIK TPDQIMELFD 480
  481 SITYSKGASV IRMLSSFLTE DLFKKGLSSY LHTYQYSNTV YLDLWEHLQK AVNQQTAVQL 540
  541 PATVRTIMDR WILQMGFPVI TVNTSTGEIS QKHFLLDSKS NVTRPSEFNY IWIAPIPFLK 600
  601 SGQEDHYWLD VEKNQSAKFQ TSSNEWILLN INVTGYYLVN YDENNWKKLQ NQLQTDLSVI 660
  661 PVINRAQIIH DSFNLASAKM IPITLALDNT LFLVKETEYM PWQAALSSLN YFTLMFDRSE 720
  721 VYGPMKRYLK KQVMPLFFYF QNRTNNWVNR PPTLMEQYNE INAISTACSS GLKECRDLVV 780
  781 ELYSQWMKNP NNNTIHPNLR STVYCNAIAF GGEEEWNFAW EQFRNATLVN EADKLRSALA 840
  841 CSKDVWILNR YLSYTLNPDY IRKQDTTSTI ISIASNVAGH PLVWDFVRSN WKKLFENYGG 900
  901 GSFSFANLIQ GVTRRFSSEF ELQQLEQFKA DNSATGFGTG TRALEQALEK TRANIDWVKE 960
  961 NKDAVFKWFT ENSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle