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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12313686, gi|...
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHGSIIASA VGVGVGVGVG IGLVSSRLTG LATGGGATAA EVEAELRCLV VDGRDVGVSF  60
   61 DDFPYYLSEQ SKLALTSTAF VHLSPTILPN HIRVLSASSR TILLCGPSEA YLQSLAKALA 120
  121 NQFSARLLLL DVIDFACKLH HKYGGPSNTQ TRERSMTEAA FDRVSSLVGA FNLFRKKEEP 180
  181 TGTGPLSRET GILDLRTSTC CPHNTPSVRV QLSLVPPEKD HDPESSKYLA SVKPCWSLNE 240
  241 KVLIQSLYKI IVSASEISPV ILYIRDVDDL LGSSEKAYCM FQKMLKKLSG RVIVIGSQFL 300
  301 DDDEDREDIE ESVCALFPCI LETKPPKDKV LLEKWKTQME EDSNNNNNQV VQNYIAEVLA 360
  361 ENNLECEDLS SINADDDCKI IVAYLEEIIT PSVSYHLMNN KNPKYRNGNL VISSESLSHG 420
  421 LRIFQESNDL GKDTVEAKDE TEMVVPDNEY EKKIRPTVIP ANEIGVTFDD IGALADIKEC 480
  481 LHELVMLPLQ RPDFFKGGLL KPCKGVLLFG PPGTGKTMLA KALANAAGAS FLNISMASMT 540
  541 SKWYGESEKC IQALFSLAAK LAPAIIFIDE VDSMLGKRDN HSENEASRRV KNEFMAHWDG 600
  601 LLSKSNERIL VLAATNRPFD LDDAVIRRFE HRIMVGLPTL ESRELILKTL LSKETVENID 660
  661 FKELAKMTEG YTSSDLKNIC VTAAYHPVRE LLQKEKNKVK KETAPETKQE PKEKTKIQEN 720
  721 GTKSSDSKTE KDKLDNKEGK KDKPADKKDK SDKGDAGETT LRPLNMEDLR KAKDEVAASF 780
  781 ASEGVVMNQI KEWNELYGKG GSRKREQLTY FL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle