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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KATAM_ORYSA
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVGGKPPQ SRLCFLATLC AMFWVLIFYF HFFVIANEPG SAGADTAAGA AASIARAELP  60
   61 LPEPERVSDP AVPLPPPALV SEPPPTTATV AKVEDEEKPT AVAHQEAAPR DYAFQRALKT 120
  121 AENKSDPCGG RYIYVHELPP RFNDDMLREC ERLSLWTNMC KFMSNEGLGP PLGNEEGVFS 180
  181 NTGWYATNQF MVDVIFRNRM KQYECLTKDS SIAAAVFVPF YAGFDVARYL WGHNISTRDA 240
  241 ASLDLIDWLR KRPEWNVMGG RDHFLVGGRI AWDFRRLTDE ESDWGNKLLF MPAAKNMSML 300
  301 VVESSPWNAN DFAIPYPTYF HPAKDADVLL WQDRMRSLER PWLFSFAGAP RPDDPKSIRS 360
  361 QLIDQCRTSS VCKLLECDLG ESKCHSPSAI MNMFQNSLFC LQPQGDSYTR RSAFDSMLAG 420
  421 CIPVFFHPGS AYVQYTWHLP KNYTRYSVFI PEDGVRKGNV SIEDRLKSIH PDMVKKMREE 480
  481 VISLIPRVIY ADPRSKLETL KDAFDVSVEA IINKVTQLRR DIIEDHEDKD FVEENSWKYD 540
  541 LLEEGQRTIG PHEWDPFFSK PKDKGGDSTN PSTNAAKNSW KNEQRGQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle