YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215678915, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVSASSST TAVAALPGAA RASSFLGGAG RSGRLLLRQA ESSSARASFA VRAAAPDRPI  60
   61 WFPGSTPPPW LDGSLPGDFG FDPLGLGSDP ESLRWNVQAE LVHCRWAMLG AAGIFIPEFL 120
  121 TKIGILNTPS WYTAGEQQYF TDTTTLFIIE LILIGWAEGR RWADIIKPGC VNTDPIFPNN 180
  181 KLTGTDVGYP GGLWFDPLGW GTGSPEKIKE LRTKEIKNGR LAMLAVMGAW FQAEYTGTGP 240
  241 IDNLFAHLAD PGHATIFQAF TPK

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	263	0.97