YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13541887, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPRILLYTG KGGVGKTSIA AATGSLLAAE GKKTLIISTD PAHSLGDAFG MEIGHNIKKL  60
   61 GENLYGQEVS VVQSINEHWG ELKDYLRSLF LSQGLDPVSA DEIATLPGFE EASELLYLRN 120
  121 YYYDEEYDTI VMDSAPTGAA LQLLSFPEVM TWYMDKLFPL GRKTARVARP ILKPFVDIPL 180
  181 PDDEVFENID LLYKQLTDIR KILTNNEVTS IRLVTNPDNM SFSETKRAYT YLLLYGYPVD 240
  241 AVVINKILSD ETGGFFEKMR VNQQDIIDEM EHSFVDVKVF KVKLLQEEPI GHEKLVELGK 300
  301 LIYGDEDPYK IFYKGTPIKY SKSGEKYILK IKMPFAAKEN INLFNHGGEL TIEIENWKRV 360
  361 FYLPESISDR RPVSAEYSNG YLNVVLE

Type	Start	End	Confidence
Signal Peptide	1	31	0.73
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	387	0.99