YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25326080
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYLPVALTI AGTDPSGGAG IMADLKSFQA RDVYGMAVVT SLVAQNTRGV QLIEHVSPQM  60
   61 LKAQLESVFS DIPPQAVKTG MLATTEIMEI IQPYLKKLDC PYVLDPVMVA TSGDALIDSN 120
  121 ARDYLKTNLL PLATIITPNL PEAEEIVGFS IHDPEDMQRA GRLILKEFGP QSVVIKGGHL 180
  181 KGGAKDFLFT KNEQFVWESP RIQTCHTHGT GCTFAAVITA ELAKGKSLYQ AVDKAKAFIT 240
  241 KAIQDAPQLG HGSGPVNHTT FKD

Type	Start	End	Confidence
Signal Peptide	1	18	0.68
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	263	0.99