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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25388168
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKKMILTS LASVAILGAG FVTSQPTFVR AEESPQVVEK SSLEKKYEEA KAKADTAKKD  60
   61 YETAKKKAED AQKKYEDDQK RTEEKARKEA EASQKLNDVA LVVQNAYKEY REVQNQRSKY 120
  121 KSDAEYQKKL TEVDSKIEKA RKEQQDLQNK FNEVRAVVVP EPNALAETKK KAEEAKAEEK 180
  181 VAKRKYDYAT LKVALAKKEV EAKELEIEKL QYEISTLEQE VATAQHQVDN LKKLLAGADP 240
  241 DDGTEVIEAK LKKGEAELNA KQAELAKKQT ELEKLLDSLD PEGKTQDELD KEAEEAELDK 300
  301 KADELQNKVA DLEKEISNLE ILLGGADPED DTAALQNKLA AKKAELAKKQ TELEKLLDSL 360
  361 DPEGKTQDEL DKEAEEAELD KKADELQNKV ADLEKEISNL EILLGGADSE DDTAALQNKL 420
  421 ATKKAELEKT QKELDAALNE LGPDGDEEET PAPAPQPEQP APAPKPEQPA PAPKPEQPAP 480
  481 APKPEQPAPA PKPEQPAPAP KPEQPAKPEK PAEEPTQPEK PATPKTGWKQ ENGMWYFYNT 540
  541 DGSMAIGWLQ NNGSWYYLNA NGAMATGWVK DGDTWYYLEA SGAMKASQWF KVSDKWYYVN 600
  601 SNGAMATGWL QYNGSWYYLN ANGDMATGWL QYNGSWYYLN ANGDMATGWA KVNGSWYYLN 660
  661 ANGAMATGWA KVNGSWYYLN ANGSMATGWV KDGDTWYYLE ASGAMKASQW FKVSDKWYYV 720
  721 NGLGALAVNT TVDGYKVNAN GEWV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle