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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|215403956
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVTPRTGSR IEELLARSGR FFIPGEISAD LRTVTRRGGR DGDVFYRDRW SHDKVVRSTH  60
   61 GVNCTGSCSW KIYVKDDIIT WETQETDYPS VGPDRPEYEP RGCPRGAAFS WYTYSPTRVR 120
  121 HPYARGVLVE MYREAKARLG DPVAAWADIQ ADPRRRRRYQ RARGKGGLVR VSWAEATEMI 180
  181 AAAHVHTIST YGPDRVAGFS PIPAMSMVSH AAGSRFVELI GGVMTSFYDW YADLPVASPQ 240
  241 VFGDQTDVPE SGDWWDVVWQ CASVLLTYPN SRQLGTAEEL LAHIDGPAAD LLGRTVSELR 300
  301 RADPLTAATR YVDTFDLRGR ATLYLTYWTA GDTRNRGREM LAFAQTYRST DVAPPRGETP 360
  361 DFLPVVLEFA ATVDPEAGRR LLSGYRVPIA ALCNALTEAA LPYAHTVAAV CRTGDMMGEL 420
  421 FWTVVPYVTM TIVAVGSWWR YRYDKFGWTT RSSQLYESRL LRIASPMFHF GILVVIVGHG 480
  481 IGLVIPQSWT QAAGLSEGAY HVQAVVLGSI AGITTLAGVT LLIYRRRTRG PVFMATTVND 540
  541 KVMYLVLVAA IVAGLGATAL GSGVVGEAYN YRETVSVWFR SVWVLQPRGD LMAEAPLYYQ 600
  601 IHVLIGLALF ALWPFTRLVH AFSAPIGYLF RPYIIYRSRE ELVLTRPRRR GW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle