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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25534796
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFMTVKTL PPNSRPIEGE LQLKDTQALV VRSSRPVSSE RPQVVVTANL EPETIVYDPV  60
   61 AVAEHYRHRP LQVLRRIFAV LGPTFSFAFG LWWDIKRGVV VKNDRRRAIE LKELLTQLGP 120
  121 AYIKIGQALS TRPDLVPPVY LEELTRLQDQ LPPFPNEIAY QFIQEELGQP PQEVYAELSA 180
  181 QPIAAASLGQ VYKGKLKTGE EVAVKVQRPD LRERITIDLY ILRGLAAWIQ KKVKRVRSDL 240
  241 VGILDELGDR IFEEMDYIHE GENAERFFQL YGHMQDVYVP RIYWEYTNRR VLTMEWINGT 300
  301 KLTQTEEISS QGIDARYLIE VGVQCSLRQL LEHGFFHADP HPGNLLATPD GKLAYLDFGM 360
  361 MSEIKPPQRY GLIEAIVHVV NRDFEGLAKD YVKLDFLSPE TDLTPIIPAF GKVFANAQGA 420
  421 SVAEFNIKSI TDELSELMYE YPFRVPPYYA LIIRSLVTLE GIAIYIDPNF KVLSEAYPYV 480
  481 AKRLLTDPAP ELRISLRDLL FKDGRFRWNR LENLLRNARK NQDYDLNLVV NQGVDFLSSE 540
  541 RGSFIRDKLV DEFLNGINAL SKNVLHNFTY LLRERVGITA INETPAATVE QQQTLEHVKN 600
  601 ILNILQETRG FDPAQFAPQV AQLAFNPGVQ RLGQQVANQL FQKATVRLIR ELLTAEEVKS 660
  661 SEIEYPTRKV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle