YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|217066086, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	17	0.96
Transmembrane Helix	18	38	0.91
Non-Cytoplasmic	39	66	0.91
Transmembrane Helix	67	89	0.85
Cytoplasmic	90	111	0.93
Transmembrane Helix	112	132	0.91
Non-Cytoplasmic	133	146	0.77
Transmembrane Helix	147	167	0.93
Cytoplasmic	168	174	0.90
Transmembrane Helix	175	196	0.91
Non-Cytoplasmic	197	213	0.87
Transmembrane Helix	214	234	0.93
Cytoplasmic	235	270	0.90
Transmembrane Helix	271	290	0.92
Non-Cytoplasmic	291	309	0.88
Transmembrane Helix	310	330	0.93
Cytoplasmic	331	364	0.96
Transmembrane Helix	365	387	0.91
Non-Cytoplasmic	388	395	0.80
Transmembrane Helix	396	415	0.89
Cytoplasmic	416	433	0.90

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRTISNFMR VAEIRRKILF TLAMLIVFRI GTFIPVPFTN GDVLKAQDQL NALGILNTFG  60
   61 GGALKNFSIF AMGIMPYITA SIIVQLLQMD VVPKFSEWAK QGEMGRRKLT QFTRYFTIVL 120
  121 AFIQGFGMSI GFNGMVGGQL ILNPGWSTYL YIATVLTAGT AFLMWLGEQI TAKGVGNGIS 180
  181 ILIFGGIAAA IPSVISQVYQ QQFQNIGDQL FMSIVKVALI LLAVLAVIVG VIFIQQAVRK 240
  241 IPIQYAKRVT GGNGGYAGAQ NTHLPLKVNS AGVIPVIFAV SFLITPPTIA QFFPKHDVSQ 300
  301 WIIANFNYSH PVGMIIYVAL IVAFTYFYAF VQVNPEQMSE NLNKQGGYVP GIRPGKNTEQ 360
  361 YLTKILYRLT FVGSIFLAAI AILPVIFTKL GNLPPSAQIG GTSMLIVVGV ALETMKQLES 420
  421 QLVKRHYKGF IKQ