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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19572377
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDPKGGGGG GGGGAANDVE MNALPRNQSV NRFQVNLVNH DEPAGHGTGN GTAPEPVTED  60
   61 DLFPEEMVKR RTSRLQSLRS SFRTDRDRDP EQPRQRKPST RFNVEGGESD SNDDEEDNLI 120
  121 DENRYARSFR HFTREALPRM DNYRNILSFQ GNQRPTLDEL HDASITNKET MRRGTVHEPA 180
  181 ELDGSIKFGW IKGVLMRCLL NIWGVMLFLR LSWVVGQAGI AQGVLLICMT TVVTTITALS 240
  241 MSAISTNGVI KGGGTYYMIS RSLGPEFGGS IGLIFSLANA VACAMYVVGF CESMIDLLAS 300
  301 FGVAIVDGAV NDVRIIGCIT IVLLLCIVVV GMEWEAKAQI VLLIILLVAI VDFCVGSLWG 360
  361 PKSELDVARG FVGYNATVLM ENMQSAYRVS KGTQHDFFSV FSIFFPAATG ILAGANISGD 420
  421 LKDPSSSIPK GTILAIAITS ASYIGMAVVA GATVLRDATG NVTDVVNGTW DFSACEETSC 480
  481 AYGLHNSFQV MELVSVFGPL IYAGCFAATL SSALASLVSA PKVFQALCKD KLYPKISWFG 540
  541 KGFGKNNEPV RGYILTFVIS VAVILVGDLN MIAPLISNFF LAAYCLVNFS TFHASLAKPV 600
  601 GWRPTFKYYN MWLSLLGAIF CIAVMFLISW PTALITFAAV LSLYLIVSYR KPDVNWGSTT 660
  661 QAQTYKNALL SVQQLNNVEE HVKNYRPQIL VLCGHPSSRP LLVNFAYLLT KKLSLLVCGH 720
  721 VTKTHVSQKY RNHLQKKAAE WFRRHKVKGF YSLIDDNDFE TGSRAIMQAS GIGKLRPNVL 780
  781 LMGFKGDWDR CEPAELEQYF NVVHKALDMY LSVAILRVGK GFDYSQVLGE DTVKFISEYP 840
  841 RTLVANDSTN DLLSHNKVSS LHGSCDSLSR NVSQASSTSD LSKTISVAPD PIDINAKLIT 900
  901 ETGQRSLKRG DPSLLYRGPG GAELPTEVLE ELTQFTSKKK TGIIDVYWLY DDGGLTLLLP 960
  961 YIISTRRNWA SCKLRVFALA NRKTELEFEQ RNMASLLAKF RIDYSDLQLL PDVTKKPNQE1020
 1021 MADFFKGLIK EFTAKDDAAD ASTAGTSTIS KAELLAVQDK TNRHLNLREY LLQHSSKSDL1080
 1081 VVMTLPMPRK GVVSAPLYMA WLEALSRDLP PFLFVRGNQT SVLTFYS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle