YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15887871, gi|...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVRNRMNLL NQIPQVLKNV AALGQTRLLM LGGVGVLSMA IILAAALYVN RPAYETLYVG  60
   61 LEKSDLNKIS IALAESGLDF QVGTDGSSLQ VPVGLTSKAR LLLAERGLPD SANAGYELFD 120
  121 NVGSLGLTSF MQEVTRVRAL EGEIGRSIQQ IDGVSAARVH IVLPDVGNFR RGEQKPTASV 180
  181 MIRASASAGR KASASIRHLV ASAVPGLEVD DVTLLDSTGQ LLASGDDVTN AAMNRSLTLA 240
  241 QNVQQEITTN IDKALAPFLG IDNFRSSVTA QINTDSRQVQ ETVYDPESRV ERSVRTVKED 300
  301 QKSQETQPDT AATVEQNVPQ AAPQGGGGGP QSSDQSAKKE EQTNYEINSK TVATVKNGYT 360
  361 LEKISVAVVV NKGRIAKMVG EPADQAKIDA YLAEMQKIVT SAAGISSDRG DIVTLTAMDF 420
  421 LETQLLDEAA SGPGVMEVLS RNSAGIINSL AFVAVAFLVV WLGVRPLVRT VTANGSAAAQ 480
  481 LSQESAGLEL PDFSPGMEAG AGGLMEGFGA DFGFDSTDDL LAGGDGEGTF NRRVREGPER 540
  541 RLSRMVEISE ERAAKILRKW AVEKAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle