YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229688369, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLKYLSIKS ASDKIKSGLL KTGVILSFSL FSSLSTAAFE VVALGVDGGV SDGNLTSYLI  60
   61 RNDSQPLYLG LDAGSVLPGI ARALEKGHFA AITDAMAAPL TRQGYIFRQS INSYFISHAH 120
  121 LDHVSGLIIG SPDDSKKTIY ASADTIDVLR NYYFNWRVWP NFTDSGSGAR LGTYRMQVVR 180
  181 PAQSLSLGLT RLTGEMYPLS HDKSPSSMLL ISSNNEFFAY FGDTGPDDVE KSKNLDTVWR 240
  241 KLAEKVTQQQ LKGMIIEVSY PNDVADNKLF GHMTPTWLLK ELKKLEQYSG EGQPLKGLPV 300
  301 VISHIKPSFQ QGQDVRKLIL SELQQGNDMG IEFILMEQGD SQKFQ

Type	Start	End	Confidence
Signal Peptide	1	37	0.98
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	345	0.99