YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CLS_YERPS
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTFYTVISW LSVFGYWLLI AGVTLRILMK RRAVPSAMAW LLIIYILPLV GIIAYLSFGE  60
   61 LHLGKRRAER AKAMWPSTAR WLSELKECQH IFANSNSEVA TPLFQLCERR QGINGVKGNQ 120
  121 LQLLTTTDDT LKALVRDIEL ARHNIEMVFY IWQPGGLVDQ VAESLMAAAR RGVHCRLLLD 180
  181 SAGSKQFFRS PYPAMMRNAG IEVVEALKVN VFRMFLRRMD LRQHRKIVLI DNYVAYTGSM 240
  241 NMVDPRFFKQ DAGVGQWIDM MARMEGPVAT TLGIVYACDW EIETGKRILP PPPDANIMPF 300
  301 EEETGHTIQV IASGPGFPEE MIHQALLTAV YAAREQLIMT TPYFVPSDDL LHAICTAAQR 360
  361 GVDVSIIVPR ENDSMMVRWA SRAFFTELLN AGVKIYQFEG GLLHSKSVLV DGQLSLVGTV 420
  421 NLDMRSLWLN FEITLVIDDD GFGADLAQVQ DDYIARSALL DGERWNKRPL WHRVTERLFY 480
  481 FFSPLL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.90
Transmembrane Helix	7	28	0.93
Cytoplasmic	29	36	0.87
Transmembrane Helix	37	59	0.90
Non-Cytoplasmic	60	486	0.97