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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52628517, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGGMMKQLV VAGFFLLLLT SPLSALDVDT YRSSQKQFNT EDKAEQGDAQ AQFELGLKYE  60
   61 KGDGVNKDLK KAIYWYQKAA DQGQAEAQNN LGVLYLKGEG VPQNSQQAMY WFKKASEQGL 120
  121 AIGQNNIGIL YENGLGVKKD PGQAFIWYQK AAEGGNSDGQ YNLAVMYMYG NGIPKDIKKA 180
  181 IHWYIKAAEQ GDLDAQNNLG VLYERGEEVP RDLKAAISWY TRAANEGSLI AQTNLGVLYM 240
  241 TGDPSIQDGK KAIYWYEKAA AQGGEKAQNN LGYIYEQGIG TEKDMKKAIY WYEKAAENGF 300
  301 TLAQNNLGVL YSNDGELQDY KKAYLWFKKA ADQGFAEAQN NLGLMYMKGN GLSVNYHEAV 360
  361 LWYKRAAEQG LPLAQHNLAI MYMKGLGIKK DNKLAIKWYQ KAAEKGLDLA QNNLAVMYIR 420
  421 GEGVKRDFKK AMYWYQKAAE QGLDLAQINL GIMYLDGMGV NKDFAKAKYW IGKAKDSGSQ 480
  481 DALTIWNKNK LWKYQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle