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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YIDC_RHOS4
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDQNKNLIL ATGLSFLVIM VWFFLFPPPE AVTEGEPTVA TQQTAVAPSA TPDAPTTAVP  60
   61 PDADLPETQR VVIDTPRLQG SISMLGGRLD DLSLKSYHET LDPQSQIVRL LSPVGQPNAY 120
  121 YALYGWTPAG ALGYEDVPGA NTTWTQVGSG ALGVDQPVTL QWDNGKGLVF TRTISVDDHY 180
  181 MFSVAQTVEN NSGQAVQLAP YGIVARHGKP LNLQNFFVLH EGVVGRADGK LTETKYDKVA 240
  241 ELPQVAREGA QAEVIDAQQD GWIGFTDKYW MTTLIPQQGQ PFTSVTKYVP GADIYQAETR 300
  301 EQLVTVAPGA TAEVSSRLFA GAKEWETIRA YQNEGATEPT EGAEPIPGFI DSIDWGWFFF 360
  361 LTKPIFTVLH WLNHMIGNMG LAIIALTFLL KALVLPLAYK SYVSMARMKE LQPELEALRE 420
  421 RAGDDKMLMQ REMMRLYKEK QVNPAAGCLP ILIQIPIFFS LYKVIFVTIE LRHAPFFGWL 480
  481 KDLSAPDPSS IFNFFGLAPW AAPTPGTTMA LIFIGALPIL LGVSMWLQQK LNPAPGDKAQ 540
  541 AMIFAWMPWV FMFMLGHFAS GLVLYWIVNN LITFTQQYVI MRSHGHHPDI FGNIKASFSR 600
  601 KPAAQPAGKA ANDGAAPAKK RKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle