YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34484272
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRNHWFNEG FPNYHPPNYE ENWNVQTPRV HRPLPPIPCH LETQYQEQCE NIVLNQQQQQ  60
   61 HLYDKNYRRF RNEDVSFPRR RIVSHGDYSE DEVVHQKQEE SANHCDYNSF VPHTSRNMSG 120
  121 DIYDDYSDID YAILDHKRKS YMNYTQELNN DYYEAERNEY KESKFEKADK ISLNAQNGEI 180
  181 KRDIISNLDI MWNPNIVEPD DYLHNPATKE RKKDYHIFTK RGILNMGSLV ILTFGIISFF 240
  241 MGYPILLYTK KIYEDIHRCP DCTKTLPIDL LNATRGLIDP DTPEEFYELK NKDGKIYKLV 300
  301 FSDEFNKNGR TFYPGDDQFW EAVDLHYWST LSLEWYDPDA ITTNDGFLEI RLDSFRNHDL 360
  361 NYRSGMLQSW NKLCLKGGII EASISLPGRG DTSGLWPAFW MMGNLGRPGF GASTEGTWPY 420
  421 SYDNCDIGIT PNQSDHTGLS FLPGMKLPGC TCPNSDHPSP GKGRGAPEID IIEASVDLSL 480
  481 HIGEASQSVQ FAPFDIQHKP NYDHMIIYNA EKTHINPYHG NVFQQTFSCI TYLNNEWYNG 540
  541 YKFQTYGLEY RPGRKGYIEW FIGDQTTWKM KSESVGPNGN IGQRLISEEP MAIIINLALS 600
  601 ETFSKIEWEK LQFPAIMRID WVRIYQEESL ITCDPPGYPT TNYIKEHPIA YYNNNVTTWN 660
  661 NTGYEWPKNR LMNKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle