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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40747358, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLVYENSP LAEYLRGEGE HSSDWPVKES EHEDDLSDST TADFAPRGAS KFQTRIRNKL  60
   61 PKPVNFNASR QTAALGRLYD VCTSALNSRL GRNDNERFLE QFGYVIVASQ LLNEHSAPSY 120
  121 TSATDVLSNT VPTDLPAIST TFGLQGAFVT ASTSFSIAWL LHWSRPRAGT GINPRKVGVL 180
  181 LVLVPVLGVL FYAFARRQWL KYLRHQAVDA AVLLIGNAQG FDSAASASVV LEDQTQVRRC 240
  241 LRLRRIVSEC FYSMLDHYIQ AQHVLQPLTD SANLAKYYDI YDISQEDLIE VETALADRET 300
  301 EDQFSLRGLR TLFGRLYLVR KSILCCLLAL GADGGGSDIA RWSTAIEQMR NLTTVTGQNM 360
  361 QRMTSVLNEE DRAADVPPSP LPTASPGKER LRAQYRKLNL LSQGIRALHA KMHVFKEMST 420
  421 NDLDRTDTSE LEASLLAQYE SIGSDIRGLL QEWESGKASL TNSLDRDSVA SRSRPPSGLF 480
  481 PVSPTPSLGG TTAVEGSPSD ALRALNGESR PVSGINYSID DVEEVLEAVA LPRNNKRASL 540
  541 TREERIARVK EDRAKQAAAR DRMDANTHML KELEMSQNGQ INTTREPYTT HSPTRVSLLD 600
  601 ISPLQLFRYL IHLFILLFCH PPFLFSNPIT LSPHSFSPLH HTKQHIKRTV LEARLEQASL 660
  661 LKRVVDAIKD LVQYCNFDCN DSGIALQAMD NSHVALVSML LKAEGFSPYR CDRNIPIGID 720
  721 LVSLTKVLRA AQNEDILTLK ADDSPDVVNL MFESAETDRL SEYDIKLMDI DQEHLAIPET 780
  781 EYAATIEMPS AEFQRICRDL NALSESVVIE ATKEGVKFSC QGDIGSGSVT IRQHTSVDKP 840
  841 EQNVSIVLSE PVALTFSLKY LVNFCKATNL SSTVSLSLSQ EVPLLVEYGL GSGHLRFYLA 900
  901 PKIGDEDIRK DFRHSKARAS AAPLRDKGPR PNQLARPQNH SFQPPQPNQE KRG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle