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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SEY1_EMENI
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNGHFAPI GSDSSDKTTY EHGVQVIDEN KEFNTNLTKY LTFENVTPAG FNYHLISVFG  60
   61 SQSTGKSTLL NHLFGTHFSV MAETERRQTT KGIWLSKNKN GDGKSMADNI LVMDVEGTDG 120
  121 RERGEDQDFE RKSALFALAT SEVLIVNIWE HQVGLYQGAN MGLLKTVFEV NLQLFLKDKN 180
  181 TTHRSLLFFV IRDFVGTTPL KALQKTLMED MSRLWDSISK PPGLERSTVH DYFDFQFYGL 240
  241 PHKSYQPEKF VEETKKLSLR FREGQKNATL NAQNGEFSEG GVFLPEYHRR IPADGFSVYA 300
  301 EGIWDQIVNN KDLDLPTQQE LLAQFRCDEI LREVMVAFDE AIFPFEDKQS QASRLGEPEV 360
  361 LGGLGAAMRS ARAKATKNFE TEASRYHKGV YQRKRAELEG KVDTRLKALF QGQLNAAHKS 420
  421 GINDFSDAVT AEVKAGQKKG TGYDFAEIVN DEVKKALQKY EEVARATVVE GAPWSNYQQE 480
  481 LALYEKELSE VSARLRRDEM RRLATRVERW VQSRLGESVG LEFNALGSGR AGGAAPESGE 540
  541 KPSEKKFWDR VWNLFVETVL DAERRFTDRA SSFDASLEEV DVGLWRLRRK SWGVLRAKIE 600
  601 EEMTEGNLLL KLRENFEDKF RYDEAGVPRI WRPTDDIEGI YTRARESTLT LIPLLSRFRL 660
  661 AETSAPPPLD RWVGHTPSSA TTADEEDLPP IGGVDEEEGK SLEEEMTILG DAKRQELTIR 720
  721 FKKAADGVYV EAKRSAIGGM TQVPLYFYGI LLALGWNEIV AVLRNPAYFF LLFVCAVGAY 780
  781 VTYQLNLWGP ILKMTEAASN QAMIEGKRRL REFLETSDTG RQAIAMSSSG SSRSGNEHEM 840
  841 SRLNKQGKSS TDEDVDDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle