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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40746955, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGQQIVLAR RAVKIEPSYL QRSGCQICGD PSRVPQAPGA WNLGLGSAED LSHRWTGVLR  60
   61 PIRRESWFLS FRWSVKFVYI FIAAIMKGIF GLSLLPLLVA ASPVVVDSIH NGAAPILSST 120
  121 NAKEVPDSYI VVFKKHVDPV AASVHHSWVQ DIHGQKSGGR ADLKKRFLGL EFGFGEEIYD 180
  181 GLKATFNIAG SLMGYSGHFH EDTIEEIRKH PDIEYIERNS EVHTLEDTDV EKNAPWGLAR 240
  241 ISHRDRLTFG TFNKYLYASE GGEGVDVYTI DTGINIEHED FEGRAFWGKT IPNNDADEDG 300
  301 NGHGTHCSGT IAGKKYGVSK KANIYAVKVL RSSGSGTMAD VVQGVEWAVE SHLKKAKKGG 360
  361 NGFKGSVANM SLGGGKSKTL EDAVNAGVEA GVHFAVAAGN DNADACSYSP AAAEKAVTVG 420
  421 ASTLADERAY FSNYGKCTDI FAPGLNILST WIGSKSAVNT ISGTSMASPH IAGLLAYFVS 480
  481 LQPSKDSAFA VDFTPEKLKK DIISIATEGV LTDIPADTPN LLAWNGGGST NYSDIIAKGG 540
  541 YKSGSHVDST PFKAGGILAQ AILTTIPNVM ISEFDPVFSS RCSSSMAASM RFSSLFGGLL 600
  601 LAGAAIAQNT SCSPKSSDAE VIEYAYALQG LLERYYTSQP INQTFLRDAT NGSRVEYYQN 660
  661 LLGIQRQNRL GVRALQQVGS QIPGFSNPRC DYSIPNATSG EDYVKNAAVL EGSVASAFIG 720
  721 ATGYTQSPEV SFILARLAAV HTADASWLAA EQRSVVFPSN VSSLVPAYNP EYVLGSGKEP 780
  781 GRLGQYLQDC VTAPSDPCGQ TFFIGPLVGS VGNRSSAAAV PSGSSASITP SISPTAAARR 840
  841 RFGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle