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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49091500, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIIARRLPH LGSYVHKWWG VNYHKLCVVG LAPPALILAR ILTFLTFSTL LLFFPTVISF  60
   61 CLPHPLPPEL SLHQFSRSPL FAQHLFIKQP DFPIFTIFEY STPPVALKSS AVSGSYHRSW 120
  121 METYHGHVRT PADAIILFEA CRIGLLPRVQ RRLSEKERQL IQSGSVFVWD EREAGMRRWT 180
  181 DGKSWSASRV SGSFLTYREM EGKRGGTSVS TQSTRAGKTP DSARGSDDDR GEGLDDGPDG 240
  241 YRYKPDGLMK QSFSITTSTG QHLHLISYYS RSHPNAANLL QPSTDPALRS VRPQKGLYPE 300
  301 STVNDQQNLP VVTRGPMTGA PYAVPPPPPP PQHHPMAAAY ARSGAAHPQS YAPGYAWPPT 360
  361 PLGTPPAVPI HYPAYISPHH PPQYHALPPP PQQPGLPPGY DRAVYDRVVH PLEGQIPLPP 420
  421 HLIPQGSIII PARSPRVIAE PTPPEYGPDR RASPRIPPPH PHSSPHANGA SIPPPTTRSP 480
  481 RVPSQALPPP GALSIPPPNP PSRPPSETSG TVVPSINVLM NSTPAALPSI SAAVPPPSLA 540
  541 PAGSGAPASS PAPATAAAAS NGRPADGPRD IPSDKIGFGG EDMRALRQLD RVFKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle