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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40742792, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQNAESAE LKQQGAIETA QAASQDPQSH IQPETVEKKL VEETRKAGLP AYQFNPDASP  60
   61 QEKAAEAESC VPPGFHRDRE PKAIGVITDK DDGTPAPYDL PPPKSATTLL DEKSQEPAAD 120
  121 KKEEEVDDEQ RWARDRTGWA PRFVHEETQE EHDEATLLDH QTFLEAKLDE KFFGDWYHNA 180
  181 GVIVFACLSS WIVAVLGGGL AWVFIIMAAC GTYYRTSIRR VRRNFRDDVN REMAKQRLET 240
  241 DTESLEWINS FLVKFWPIYA PVMCDTIINS VDQVLSTATP AFLDSLRLKT FILGSKPPRL 300
  301 EHVKTYPKTE VDTVIMDWKF SFTPNDTMDL TARQVKDKIN PKVVLEVRVG KGVVSKGLDV 360
  361 IVEDMACSGL MRVKVKLQIP FPHIERVDVC FLGRPELDYV CKPLGGDTLG FDINFIPGLE 420
  421 SFIKEQIHAN LGPMMYEPNV FPIEIAKMLA GNAVDQAIGV VAVTLHGARQ LKNPDKFAGT 480
  481 PDPYAVVSLN NRTEVGRTKT IQDTDSPRWN ETIYVIITSF TDTLTIQPYD WNEFRKDKEL 540
  541 GTATFALDKL EQEPEHESVY LEVLASGRSR GSIHADIRFF PVLEGRKLEN GETEPPPELN 600
  601 TGIARFTVEQ AKDLDGSRSL VGQLNPYGVL LLNGKEIHIT NKLKRTNNPI FQNASKEFLV 660
  661 TDRKTARLGL VIKDDRDLVK DPILGSYQIK MNDMLKMMEK GHQWFHLHGA KSGRAKLVLD 720
  721 WKPVAVGGIA GSAGYVDPIG VMRIHFKDAA DLRNLEKMGK SDPYARVLLA GYMKGRTVTF 780
  781 RNNLNPDWDE VVYVPIHSAR EKLTLEVMDE ESVGSDRSLG SVELSAADYV HENEAGEYEI 840
  841 DDEKQLVSSS LRLGQRAKGT LNYTVAFYPT IPVVNPEDEE EEEEEAEAEA EAETEAAGLT 900
  901 RKSTDSRRKS YHSKSRSVDS KISDNKGATN GTADLQSNGR PSLESRSGTV KDSETASVRS 960
  961 IKEVPKTYIS VDDLANHVWS SPKIRTKTAK IEDIGDAFVR ELEFSKITLR IVEKVNADTD1020
 1021 DDEHIVAKLT GDTFSTLQRI LYTPTELVLR STDGEVSRVT VSARYIPVTM KLDPSESINN1080
 1081 MGTLRVDVLD AADLPSADRN GYSDPYCKFR LDGKEIFKTK VQKKTLHPAW NEFFETPIKS1140
 1141 RIGANFRCDV YDWDFGDKAD YLGGVPINLE MLEPFQAQEV SLTLDGKSGA IRLKLLFKPT1200
 1201 YVMRSRQGSS TFSGTFATPG KIVGAPVKGV GFVGGNVIKG ASFLGRGIMS KIRGDDSSSD1260
 1261 EEQEQQKEVP SAILVDGETP PNSTPKSDLN HSRTRSVAAS HYGDRLSIGG KGESGTARIS1320
 1321 IVSAGGYPPS ANVRVLVRAL GAKGAKEVLK TKAIKSGGGP VVFDSASESC RVHNTTADAQ1380
 1381 YQIRVVDHST FGSDNVLGEA AFFVGDQGSV AGQEKTVNVG SGTVVVRSSF SAAGDSLRPG1440
 1441 TAYSNAGDNA SEVTDSPDSK KPRRSFLSKR SVSGA

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