YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40739507, gi|...
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSQIVTAAK GILFPEQNSY GNSTTATTEP NETLPATKSK MVTTRRSAAF QAVSPTEDAE  60
   61 MNGSPELSGK RKSDNSTLAR SPETQGNKRR KRSSVETTED MVKETNEDIG QEAAPKKHFR 120
  121 FDSEEPVLPD VAESEVPVDA QQKQLDEEDS SEDEAPETVD NSTQLNKIKL EAKKRDEARK 180
  181 IEEQAKREKR RQLDEARKQQ AKASAKRKEV HTSQVMPGAG TPAEDMLSES SATLQGSFTQ 240
  241 DTRRSTLPAL LPDDILNAVP DVRPPTPPPE FEVFSQKKPT KLRFLEKKEK APKDVRMGDV 300
  301 AIRVLDSESS RKQPNTALAP KASKASRGAR EAWLKQARST GHVNGMRMVS SGKRSFVRNS 360
  361 GKCDDHNGNL MASATESSPL LPQYHHAASS NTSPRGNRPP RTVTFNPLTT VSTYHDSASA 420
  421 DPKFKPLASG NSSLANSRPT GLSALNSKLR RRNSHGAPGS VASSYPASKI GPQRTTKTAQ 480
  481 KLKLLPDPIT EEELVDEETS PSDVYRQIAR IKEPAARSLA AKLGKADRDR LPRVTAYCTA 540
  541 NSYRLDGVFK FLKSRSKTRG ANPKLFDECV YSRFDYQFEA KQKAGNHSNN VDSENTHTVD 600
  601 RMPRERRFSD SAVEVNEDFG NRREELIDLH DRDSHQQNAT EASVLDNAPD IDTTIHAPEV 660
  661 FLFDYGTVVI WGMTPAQESR FLSDISKFAT SILSPEDTQV ENFNFYYARE YQARIYNDFI 720
  721 SLRDPRNYMI KLAISHALAQ SVKTSLFEDL VSETISNTAP LPAQIAQTGS VNLSRRQINM 780
  781 QVGELFILRI NIHLQGSVLD SPELMWAEPQ LEPVYQAVRS YLEMDQRVSL LTERLDVIAD 840
  841 LLAVLKDQLT HRHGEYLEWI VIVLIAAEIL VAAINIVVDL YAGVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle