YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67541064, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNALHSEYM TLKSLGRPHL AIDDELDYLE YELYMQIRGA EYQASQDNQP AEFRTVYADM  60
   61 VILAELRRLA DKSGFALLRA PYLDFFSTLA RCVAAFSILS PDSSFSPIVV CFASRTSPVG 120
  121 PSLVTSSGRR LGAPAASSFP LSTTREHETW SSAVKIAVQS FREIDQVLGV APDSVLPLQM 180
  181 HRRSSGSSPD ADDAEDSLAS RSSEPSHGCE LPEKPLPEIA RTGTSIDLRR DTNGKSTPRS 240
  241 RNSSTWRTLS SATTTWASHD PPRYPAVMIT PQRLAIEASP DSPHRSRLAR LRSPWSCSIL 300
  301 TALTTILACV FLFSIVRSFS ALQTGSDGCG VPVMSPTFLR MVGFDTEHTR FASKYNLFLY 360
  361 REEGVDPYNH ENLGLNGAPV LFLPGNAGSY RQVRSLAAEA SRHYAQVVQH DQERLRAGTR 420
  421 SLDFFMIDFN EDMAAFHGQT LLDQAEYVNE AVAYILSLYH DPRRTRRDAD LPDPSSVILI 480
  481 GHSMGGIVAR TALTMANYQE NSVNTIITMS APHAKAPVSF DSDIVHTYKQ INDYWREAYS 540
  541 QTWANNNPLW HVTLISIAGG SRDTVVPSDY ASISSLVPET HGFTVFTSTM PDVWIGVDHL 600
  601 SITWCDQFRK AIIKSLFDVV DVRRASQTKP RAERMRIFKK WYLTGLESVS ERMLTRNEPS 660
  661 TLVTLEDHTN TILAQGQRLV LRELGHRTGP NVHLLPVPPQ GVSGKKFTLL TDQRLDRTGE 720
  721 QGSLEVLFCS VFPLHNGKAS SVFALNMDSS DSSGSTRLAC KNAAVDEIHL PASTRTSRNA 780
  781 YDRARPFSYL QYDLEDLAEH QFVAVVDKAR VPMKGWAIAE FSDSSDALIK ARIGLGGLLS 840
  841 AGLKVRLPAN RPMLTEVRIP ALYSSLLDYK LRVVRHHQAG DPRELFAPLL RQSIADPHES 900
  901 KFFVNVDKVN VNLHGLAPYM PPPLRQTSQN GVSFQLWTDP TCDSTVDITL TVDIVSSLGE 960
  961 LVMRYRTVFA AFPLLVVSLT LRKQFQVYDE TGFFITFAEG LDSALRSSMP ALLLAMSLLA1020
 1021 SSLATSTKLP TGDDPFHWAT NSTETPIDFT KNDLLLGSQD AFFWFLVPLF GLICVGVCVL1080
 1081 LNYVALIVLQ ILSVVYGLWN SKSGYIRRDE KGYLPVFPAP SPRRRMIKMG VLLVLVSTAI1140
 1141 PYQFAYLVAC IVQLATCVRA QWHAKETRST AHYNFANYAY SVFILMLWVL PINILVLLVW1200
 1201 AHNLVVHWFM PFSSHHNVLS IMPFIILVET MTTGSMIPRV TTRFKHVTSV LLFCIAVYSA1260
 1261 VYGVSYAYIS HHLVNILAGW LVSIYFFRSG FSLHRFWKIV EGDETPSTPE SGSHMKKKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle