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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40738634, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDEASQHTL PHGDDPDSRS TSRCMTPSLM NQTFEEATTI SPHAIIRLIQ CSRCSFPLQT  60
   61 PLRLPCGGVS YPAIEERKQG FTCYGGEGGC GADHCLGDCG TDVLLSRLVE VFDEVLEDDS 120
  121 STTKDGNPGQ TVAWVGALPD RGKLEQSAEI GPEPLTGVFN LVKGGRFGYN VSEVSYQPPL 180
  181 SACYTKYTRT LTKLRATVRN ELDCQVCYSL ILDPLTTPCG HTFCRRCVAM ALSHSNLCPI 240
  241 CRRKLNMPSS VRSERNNKSL SDIIETLLPD EVASRRADVA SNIELNSEGK LPLAVVSLAF 300
  301 PTMPIGLHIF EPRYRLMIQR VMESGSRKFG MVMPNRRGHL QQGLGRAPFM RYGTILAINR 360
  361 HELLPDGRSL LIATGTSRFK VLSWELVDGY HVGKIQRVDD VSISEEEAQE SRETATIEPG 420
  421 SSTSDRSIDS MSTQELYQLA LDFVLRERRL GAPWLHPRVL LAYGALPTDP ALFPWWFATV 480
  481 LPRWEEEKYM LLETTSVRQR LKITARWVKR LESRQWVVTT FGPFPMSVSI TFGPGGAVSQ 540
  541 FGGPDLVATN SSDTYLSQTL VLGVFLAIFM AQMAANVVQV VRSRQPARVE NTQTQREQPD 600
  601 LPAEVQEGAE QGQRQNPADM EPG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle