YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENT7_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	15	0.98
Transmembrane Helix	16	36	0.91
Non-Cytoplasmic	37	52	0.80
Transmembrane Helix	53	72	0.91
Cytoplasmic	73	83	0.86
Transmembrane Helix	84	103	0.96
Non-Cytoplasmic	104	109	0.81
Transmembrane Helix	110	130	0.94
Cytoplasmic	131	144	0.79
Transmembrane Helix	145	167	0.89
Non-Cytoplasmic	168	181	0.92
Transmembrane Helix	182	204	0.93
Cytoplasmic	205	263	0.96
Transmembrane Helix	264	284	0.91
Non-Cytoplasmic	285	291	0.91
Transmembrane Helix	292	314	0.79
Cytoplasmic	315	326	0.88
Transmembrane Helix	327	346	0.94
Non-Cytoplasmic	347	352	0.86
Transmembrane Helix	353	376	0.88
Cytoplasmic	377	387	0.89
Transmembrane Helix	388	412	0.90
Non-Cytoplasmic	413	417	0.94

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPEDIPSR IEGKNVARLV CCFLGVGSLV AWNAMLTITD YYYQLFPKYH PSRVLTIVYQ  60
   61 LVANVFIITL ATKEAKLNTR LRNIFGYSLY TAGTFCLIIL DLASHGSGSV VAYVLLCLIV 120
  121 ALFGLADAFV QGAMVGDLSF MSPDFIQAFM AGLGIAGALT SVLRLITKAI FDNSPDGLRK 180
  181 GALLFIGIAT LIELACVFLY TLVFAKLPIV KYYRAKAGKE GAKTVSADLA AAGLQEQAEQ 240
  241 VHQMDESKIQ KLTKKQLLRE NIDLGINLSL IYVVTLSIFP GFLYENTGEH RLGDWYAPVL 300
  301 VAMYNGWDAI SRFIPSIKPL AMESRKWITV CVVARLLLVP AFYFTAKYAD QGWMLFLTSF 360
  361 LGLSNGYLTV CIFSTAPKGY NGPEANALGN LMCVFLLGGI FAGVCLGWLW LIGNDSF