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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46361570, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSLLILLP LSVAFNLDVE NPAVYNGPSG SYFGYSVDFY MTDSSVSIIV GAPKANTSQP  60
   61 KITEGGSVFY CPWSLSQSQC SSIEFDRLGD LNMSVNDTDH QGEFKSHQWF GATVRVHQDS 120
  121 VLACAPLYSW RTKEDTPHAD TTGSCFMSVK NFTKFVEYAP CRTEFRGRKG QGYCQGGFSA 180
  181 DFTQEGKVVL GGPGSYFWQG QVITAFKQEI VKAYYPGYFL TSVGGQIQTK QRKEIRFDDT 240
  241 YMGYSVAVGE FTGDDDEDFV TGVPRGVRLH GQVSILNSSL DVLKMFTGEQ MGSYYGYSVA 300
  301 ATDINNDGMM DLLVGAPMFM VRDSDGRLEE LGRVYVYMQK GPLDLIPQLP HLTGTQMFAR 360
  361 FGSSITPLGD LNQDGYNDVA ISSPFGGEDK QGLVLIYNGN AGGLREKPSQ VISGQWASAG 420
  421 LSAIPASFGY ALRGGKDLDN NGYPDLIVGA FGADKAVLYR SRPIVNTSAI LNVYPIMINP 480
  481 EEKVCAISRG NETLHVSCVN LSFCLSANGK HLPNHLEFNV EVQLDRLKQQ QKGAVRRALF 540
  541 LETQLPALHR TLTVPNGARV CSDTKIYLRD EKDFRDKLSP IFVALNFSLN PQAAADRHGL 600
  601 QPILNYQTAE LIEQKAQILL DCGEDNICVP DLKLSVHGDR KEVYMGDDNS LTLTFNAKND 660
  661 GGGAYEAELY VVLPPEADYS GIARNNESLT QLTCSYETEN QTRYLSCDLG NPMKSGTSLW 720
  721 AGLRFTVPRL KDTHNFVQFD LQIRSKNENN SQSEVVPYKL EVVVRSDVIL QGVSRPDKVF 780
  781 FPPPNWKLTK NVMVEQNVGP SVQHTYELVN NGPSRISHTL LQLKCPMRLH SNRFIYPLEV 840
  841 TTEGPVNCTT HNIINPLNLK LQQSSTEQPP VRDSGHEHHI EKRDTHKGEL SQLTNLSCSS 900
  901 VDCWTLMCNV GLLERGTSAI LHVRSRIWAE TFMENTYKNF ILECHASYKV EKMPYAILPK 960
  961 VTPSGSKKMV TPVVWNKPDS SYAVPLWIII LAILAGLLLL ALLIYVLYKL GFFKRTPYGT1020
 1021 AMEKAQLKPQ AASEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle