YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24020878, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSFSGADAL LGAPFAPLHG GGSLHYALAR KGGTRSTAGS SSGFHSWART SVSSVSASPS  60
   61 RFRGAAATSS TDSLDTLSNG PEGCVVAAAA ARSEKEQLQA LNDRFAGYID KVRQLEAHNR 120
  121 SLEGEAAALR QQHAGRAAMG ELYEREVREM RGAVLRLGAA RGQLRLEQEH LLEDIAHVRQ 180
  181 RLDDEARQRE EAEAAARALA RFAQEAEAAR VELQKKAQAL QEECGYLRRH HQEEVGELLG 240
  241 QIQGCGAAQA QAQAEARDAL KCDVTSALRE IRAQLEGHAV QSTLQSEEWF RVRLDRLSEA 300
  301 AKVNTDAMRS AQEEITEYRR QLQARTTELE ALKGTKDSLE RQRSELEDRH QADIASYQEA 360
  361 IQQLDTELRN TKWEMAAQLR EYQDLLNVKM ALDIEIAAYR KLLEGEECRI GFGPSPFSLP 420
  421 EGLPKIPSTS THIKVKSEEK IKVVEKSEKE TVILEEQTEE IQVTEEVTEE EEKEAKEEKG 480
  481 EEEEAEEGEE ETKSPPAEEA ASPEKEEAKS PEKAKSPMKE EAKSPAEAKS PVKEEAKSPA 540
  541 EVKSPEKAKS PMKEEAKSPT EVKSPEKAKS PAKEEAKSPV EAKSPEKAKS PVKEEAKSPE 600
  601 KAKSPVKEEA KSPEKAKSPV KEEAKSPEKA KSPEKAKSPV KEEAKSPEKA KSPVKEEAKS 660
  661 PEKAKSPVKE EAKSPEKTKS PVKEEAKSPE KAKSPEKAKS PVKEEAKSPE KAKSPVKEEA 720
  721 KSPEKAKSPV KEEAKSPEKA KSPVKEEAKS PEKAKSPVKE EAKSPEKPKS PVKEEAKSPE 780
  781 KAKSPEKAKS PVKEEAKSPE KAKSPVKEEA KSPEKAKSPV KEEAKSPEKA KSPVKEEAKS 840
  841 PEKAKSPVKE EAKSPEKAKS PEKAKSPVKE EAKSPEKAKS PEKAKSPVKE EAKSPEKAKS 900
  901 PEKVKSPVKE ETKAPEKEVT KKEEAKSPIK EEEKPQEVKV KEPAKKAEEE KAPATPKTEE 960
  961 KKDSKKDEVP KKEAPKPEVP EKKEPAVEKP KESKVEAKKE TEDKKKAVTP EKEVPAKVKE1020
 1021 EAKPKEKAEV AKKEQDDAKA KEPSKAAEKE PEKPKKEGTP AAPEKKDVKE EKTPEAKKSE1080
 1081 EKPKAEAPAK EEPSKEAPTP GKAKTEKAEK SSSTDQKDSR PAEKATEDKA SKGEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle