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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK22_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRSFLSIL CFILLAFGVA SVSAQTCIEN RKYFTPNGTY DSNRRLILSS LPNNTASQDG  60
   61 FYYGSIGEEQ DRVYALGMCI PRSTPSDCFN CIKGAAGWLI QDCVNQTDAY YWALDPTLCL 120
  121 VRYSNISFSG SAAFWEIEPQ YLVLNTATIA SDLTDFKNIW EDLTSRTITA ASAARSTPSS 180
  181 SDNHYRVDFA NLTKFQNIYA LMQCTPDISS DECNNCLQRG VLEYQSCCGN NTGGYVMRPI 240
  241 CFFRWQLFTF SKAFHNITLA TPPKPPMNVP RPPSVGHGAN TTDNDSRGVS AGIVVVITVP 300
  301 AVVIVLILVV LGFFICWRRK SLQRTEFESD SDVSTTNSLQ YEFKTIEAAT NKFSKSNKLG 360
  361 EGRFGEVYKG KFSNGTEVAV KRLSKVSGQD TKKFRNEAVL VSKIQHRNLA RLLGFCLQGD 420
  421 GKFLIYEFVL NKSLDYFLFD PEKQGELDWT RRYKIIGGIA QGILHLHQDP QLTIIYRDFK 480
  481 ASNILLDADM NPKISDFGMA TVFGMEESRG NTNWIAETFV YMSPEYAVHG KFSMKSDVYS 540
  541 FGILILEIIS GKKNSSLYQN DETTTAGNLV TYAWRLWRNG SQLKLLDSSI GRNYQSNEVT 600
  601 RCIHIALLCV QENPEDRPKL STIVSMLTSN TISVPAPGIP GFFPQSRREL DPLSEGLESG 660
  661 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle