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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|987866, gi|45...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIICRQLVL LFSGFWGLAM GAFPSSVQIG GLFIRNTDQE YTAFRLAIFL HNTSPNASEA  60
   61 PFNLVPHVDN IETANSFAVT NAFCSQYSRG VFAIFGLYDK RSVHTLTSFC SALHISLITP 120
  121 SFPTEGESQF VLQLRPSLRG ALLSLLDHYE WNRFVFLYDT DRGYSILQAI MEKAGQNSWQ 180
  181 VSAICVENFN DASYRRLLED LDRRQEKKFV IDCEIERLQN LLEQIVSVGK HVKGYHYIVA 240
  241 NLGFKDISLE RFMHGGANVT GFQLVDFSTP MVTKLMQRWK KLDQREYPGS ETPPKYTSAL 300
  301 TYDGVLVMAE TFRNLRRQKI DISRRGNAGD CLANPAAPWG QGIDMERTLK QVRIQGLTGN 360
  361 VQFDHYGRRV NYTMDVFELK NTGPRKVGYW NDMDKLVLIQ HEPTLGNDTS AMENRTVVVT 420
  421 TILEAPYVMF KKNHDTFEGN DKFEGYCVDL ASEIAKHIGI KYKIAIVPDG KYGARDPETK 480
  481 IWNGMVGELV YGKAEIAVAP LTITLVREEV IDFSKPFMSL GISIMIKKPQ KSKPGVFSFL 540
  541 DPLAYEIWMC IVFAYIGVSV VLFLVSRFSP YEWHTEEPED GKEGPSDQPP NEFGIFNSLW 600
  601 FSLGAFMQQG CDISPRSLSG RIVGGVWWFF TLIIISSYTA NLAAFLTVER MVSPIESAED 660
  661 LAKQTEIAYG TLDSGSTKEF FRRSKIAVYE KMWTYMKSAE PSVFTRTTAE GVARVRKSKG 720
  721 KFAFLLESTM NEYIEQRKPC DTMKVGGNLD SKGYGVATPK GSPLGNAVNL AVLKLNEQGL 780
  781 LDKLKNKWWY DKGECGSGGG DSKDKTSALS LSNVAGVFYI LVGGLGLAML VALIEFCYKS 840
  841 RAEAKRMKLT FSEAIRNKAR LSITGSVGEN GRVLTPDCPK AVHSGTAIRQ SSGLAVIASD 900
  901 LP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle