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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54650730
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGLLILLCSA VLGKSQMCEV ETGQTNIILD IEESRESFIG QPTTPPELPI FGDPDTEIAL  60
   61 NLVFPKGQPI FQLNGKKLQL LQPLDRDEEN LSHIVFQVSC TTRSTGKKRT IPIIVRVSDI 120
  121 NDNAPRFMNT PYEVTVPEST PVGTTIFRNI QALDKDAGVN GLVEYFIAEG SPNSTNVEKY 180
  181 SADGYGTFAI SFPHQGQVTV AKTLDFEKIQ TYYLTIVASD RARNTADRLS STTTLTVNIA 240
  241 DSNDLDPSFI YSGCVSLDGA CINPEYSASV PAGSLLGVLT VLPERIQAVD LDTINSPIRY 300
  301 SFASGMPGNY ADYFQIDEST GVLKQTKAVD TSTAKKYDII VKAEEVSPGP QRFTTAKLEI 360
  361 FVKPVDANPP VISSSQAEGY VDENSPIGTR VLDAHGNPIS FMTTDADLSD SDPKPDYIYE 420
  421 LTTPSFNVTG DGILVVNEEN LDRDPPAPGR FKFQVVAREP RTNAASAPLS LTVHLRDVND 480
  481 NAPKLAMVAP ISITAGDQSE SRLVTQVTAT DNDEGPNAVV TYSIYHVSNN GIQKFTINAT 540
  541 TGEIRTQGRL LAGEQYSITV QATDIGGLSS QAIVEVSVTP GPNTKPPRFQ KPIYEVQVSE 600
  601 GAEINSTVTV VHAEDPENDA VVYSIISGND LRQFAVGQES GVIIVIRKLD RESLTRYQLI 660
  661 LKAEDTGGLS SSATVNIKVT DINDKNPEFE ASTLPYVFQV EEGKAQASVG VVHATDADEG 720
  721 INAEITYSIP TDIPFTINAT SGEILTAKEL DYEQLNEYKF VVTAKDGAPD ARLGTASVTV 780
  781 MVLDLPDEVP KFSDARIDVH IPENEENFLV ATVQAFDPDS MPEITYVLRK GNAELFKVSE 840
  841 KSGEVRTIKG LDYESQKQHQ LTIGTIENDG NGPGDTILLV VDVEDRNDLP PRFITVPDPV 900
  901 TVNDDQGIGT IIATLPAIDG DGTSPGNVVR YEIVGRGKAP KYFQVDPDTG AVRIRDELRK 960
  961 EEDTEYQVDI RAYDLGEPQL SSVAPLRVDV HHLLSSGNNE IKLDNKLESG TGMSSESIGL1020
 1021 AFSDDSYTTS VPESMEANST LKLIQIVNSK TSGDGPPAFR CEFVSGNGGG IFNLSSADHG1080
 1081 CNLLLIQPLD FENKSSYSLQ LRLTSHRYFV NPLKDTTSVE IIVQDENDNA PEFEFNRLRG1140
 1141 QQDTFYTVVT EEMDVDTTIL QVRATDRDSG KFGTVRYTLY DDDENRVNMP TSFFMMSEDT1200
 1201 GVLRTAKHFK NENDFPLTFL VEARDSDGQE QGSHRTRARI VVNKLADINR MALSFPNAAP1260
 1261 SDLRNYYTEL EELLDKKTGL VSGIERMSSQ KYLAKNGSVI ENPAATDIWF YLIDPKTEQL1320
 1321 VSRKDSIVET TLLEPAARSE LNIALPRATA ENISFPLERK EHVHKVKAAV AIDNEVFPFT1380
 1381 LIAISLVILI LGTIGIIYIC ISWSKYKNFK QRMRQYSSTN PPRYDPVIVN QQASSASETI1440
 1441 ANMKEYETQM LAMAVPPDVD DDLQLDFSAK NHAFSLDNVS YITHKENTNG GGQSSPSHSD1500
 1501 ATTATIATLR RHKNLNNASM NNNLAINNRQ NTFNRTLEMN TRNNANPLAS PPNGALSGTL1560
 1561 TLGRIKHQNS NHYQNGAYNI DPTGPNNMAH AKNNAYSTMG RRGNTFGDVG LLNGNGELMN1620
 1621 ATLGRNGQLN NRLYGGEVPI TNPLFQRSNS DHNHLSSTNE NVSFGKRDYG QIGFSYLNDL1680
 1681 DRSEVETTTE L

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