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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DBP3_CANAL
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFSSGKFLF VFLFFFFFKN TSCSNQRKYI TKQQTMSKDK KEHKDKKRKH DNEDVEIADS  60
   61 KKQRKLEKQE KKDKKDKKDK KEKKEKKEKK HKKEKKHKDS ESSPVEPAAN DSSSSTNYTQ 120
  121 SSKLSSVSQS DIDKFLSDNE ITVEDPSSSS LRPILSFDQV QLTSAITSKL SKFDKPTPIQ 180
  181 SVSWPFLLSG KDVIGVAETG SGKTFAFGVP AINNIITTGN TKTLSVLCIS PTRELALQIY 240
  241 DNLIELTADS GVNCVAVYGG VSKDDQIRKI KTANVVVATP GRLVDLINDG AINLGKVNYL 300
  301 VLDEADRMLE KGFEEDIKTI ISNTSNSERQ TLMFTATWPK EVRELANNFM NSPVKVTVGD 360
  361 RDELSANKRI TQVVEVINKF DKEKKLIQLL RKYNANESSD NKILIFALYK KEASRIENFL 420
  421 KRNRFSVAAI HGDLSQQQRT AALSAFKSGQ SNLLLATDVA ARGLDIPNVK VVINLTFPLT 480
  481 IEDYVHRIGR TGRAGAKGTA HTLFTEDEKH LSGALCNILR GANQPVPEEL LKFGGHTKKK 540
  541 AHSVYGAFYK DVDMTKTAKK IKFD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle