YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.12306, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNATILDYFH YPNGKTKEYS RLRNYITSKY GNITTLLLFL FIISIPIYKY FIIHNYHHRF  60
   61 KSNIIRSFNR KLDHYTQHEH HPNCQTATFK DRFYTYIAQL LKSIVFNITL RSSTIIQLLF 120
  121 WITFLTSLSL VDIYNGDLIF LAKRLGRIPA NCLPTILFLT LRPSPLPHTL YLTLIPIHKW 180
  181 LSRLIIIQSV IHTVLYLGYF QKTNTTQKTF KPENNYGWVA LLGFVIIMIT SLSSMRKRWY 240
  241 KVFYCMHYLW TWTIVVCLQF HIRPSPFTFY TLANVSILVG QIAYRVCLTR VSNKGEVKVF 300
  301 DVSPNIAMIE FPNSLIAKTA TAPGAHIRLT NYSSSFIVRA FKQLIPNYHP YTLVSFPTDK 360
  361 YQRLIIRKSN FKLYNMRRYM IAGSYDPHLL FIGSKSSQNF SLSKLSVNAK RLLIVIGGSA 420
  421 ISFALPILRV MNYHGIPTKI VWVIKDFRDV LVLRYFDGFI HGDDFEIFIT GDSTIKEQAK 480
  481 TLRNAISCAS NFSKKSRISS HFDIEHDETS PLLSDNNESQ IPLNLENQIE NVDISMNSDD 540
  541 EEEQDSDSDC THNGINHSRY EDFNDVDDIL VDSSDIEDGG SVREFEITGD SLSPQNTTSR 600
  601 NVSRKSSVNE PFVPYFEQSS SDQTKSWVQQ FKSLTRRLNL ENKIYKGRPK LNHRYYNWCI 660
  661 NEGFTQCSGP TEDENHNLIC CRDLPRNKVV QEDLNAEKIW VISAGPKPLV ENVKLWATEY 720
  721 GLKFHEEAFY S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle