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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4788, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRQVNKKAI SNGLFKRLSL SSSAFANITA NKKSSTHQLN QKTQLTNVRF YSTKSTVIQL  60
   61 LNNIGSKREV EQYLKYFTSV SQQQFAVIKV GGAIITQQLN ELASCLAFLY HVGLYPIVLH 120
  121 GTGPQINELL ENEGVEPEYI DGIRITNPKT MEVVRKCFLE QNLRLVTALE KIGVHARPIT 180
  181 AGVFEAEYLD KDKYQLVGKI TSVNKSPIEA AINSGYLPIL TSLAETSSGQ LLNVNADVAA 240
  241 GELAREFEPL KIVYLNEKGG IINGNTGEKV SAINLDEEYE DLLKESWVKY GTKLKIKEIH 300
  301 DLLQHLPRSS SVAIIDVNDL QKELFTDSGA GTLIRRGYRL INRNSLRDFG NPDLLRNALL 360
  361 RDPEIKTGKV SVASYLKFLD SVQFKSYGDE PLEVLAIVVE QNDKIPKLDK FLSSKTGWLN 420
  421 NVTDNIFNAI KKDYSQLCWV VNENDANLPW YFSKSDGSFA KNGQILFWYG LNIDEASKLI 480
  481 KEFDSSSIGS SLSSSKESGV FTSAQQKRGF HHSTVRRNTN PNPPLSEGKQ TERKKVALIG 540
  541 ARGYTGQNLI KLIDNHPYLD ISYVSSRELE GQKLQGYNKD NIVYSNLQIE DIKRLEENNE 600
  601 VDVWVMALPN GVCKPFVDTI DLVQNPNSKI VDLSADYRFD TTGEWTYGLP ELNDRKTIAQ 660
  661 AKKISNPGCY ATAAQVAIAP LKEYISGTPS IFGVSGYSGA GTKPSPKNDV NLLSNNLIPY 720
  721 SLTDHVHEKE ISSQLGLQVA FTPHVAQWFQ GITHTINIPI KKGSLTSREI RNIYQDRYQG 780
  781 EKLITISGEA PLVKDISGKH GVVVGGFAVN SNEDRVVIVA TIDNLLKGAA TQCLQNINLS 840
  841 QEFGEYDGIP TESLIRG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle